8PXX | pdb_00008pxx

Structure of the WW domain tandem of PRPF40A in complex with SF1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF190% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
22D 1H-15N HSQC900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A90% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
33D HNCA590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF190% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
43D HNCACB590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF190% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
53D HNCACB900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A90% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
123D H(CCO)NH900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A90% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
112D 1H-13C HSQC aliphatic590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF1100% D2O133 mM6.51 atm308Bruker AVANCE III 900
102D 1H-13C HSQC aromatic590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF1100% D2O133 mM6.51 atm308Bruker AVANCE III 900
92D 1H-13C HSQC aliphatic900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A100% D2O133 mM6.51 atm308Bruker AVANCE III 800
83D HCCH-TOCSY590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF1100% D2O133 mM6.51 atm308Bruker AVANCE III 900
73D HCCH-TOCSY900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A100% D2O133 mM6.51 atm308Bruker AVANCE III 800
63D 1H-15N NOESY590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF190% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 800
173D 1H-13C NOESY590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF1100% D2O133 mM6.51 atm308Bruker AVANCE III 800
163D 1H-13C NOESY900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A100% D2O133 mM6.51 atm308Bruker AVANCE III 800
153D 1H-13C filtered NOESY590 uM [U-100% 13C; U-100% 15N] PRPF40A, 590 uM SF1100% D2O133 mM6.51 atm308Bruker AVANCE III 900
143D 1H-13C filtered NOESY900 uM [U-100% 13C; U-100% 15N] SF1, 900 uM PRPF40A100% D2O133 mM6.51 atm308Bruker AVANCE III 800
132D DSSE-HSCQ150 uM [U-100% 15N] PRPF40A, 150 uM SF190% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
182D DSSE-HSCQ150 uM [U-100% 15N] PRPF40A, 150 uM SF1, 10 mg/mL Pf1 phage90% H2O/10% D2O133 mM6.51 atm308Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III900
2BrukerAVANCE III800
3BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5chemical shift assignmentCcpNmr AnalysisCCPN
3structure calculationARIALinge, O'Donoghue and Nilges
4data analysisPALESMarkus Zweckstetter