8PTL

human PHOX2B C-terminal domain including the polyA fragment at 278K


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
22D 1H-13C HSQC0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
33D 1H-13C NOESY aliphatic0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
43D 1H-13C NOESY aromatic0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
53D 1H-15N NOESY0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
63D CBCA(CO)NH0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
73D H(CCO)NH0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
83D HBHA(CO)NH0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
93D HN(CO)CA0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
103D HNCA0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
113D HNCO0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
123D HNHA0.5 mM [U-13C; U-15N] human PHOX2B, 5 mM potassium phosphate, 10 mM sodium chloride, 2 mM beta-mercaptoethanol, 0.05 mM DSS, 0.03 % v/v sodium azide90% H2O/10% D2O10 mM6.8AMBIENT atm278Bruker AVANCE NEO 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsTopSpin
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin4.1.2Bruker Biospin
2chemical shift assignmentNMRFAM-SPARKYLee, W.; Tonelli, M.; Markley, J. L. NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy. Bioinformatics 2015, 31 (8), 1325-1327. DOI: 10.1093/bioinformatics/btu830.
3structure calculationCYANA3.98.13Guntert, Mumenthaler and Wuthrich
4refinementPROCHECK / PROCHECK-NMRLaskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton