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Aurora-A in complex with CEP192 and an inhibitory monobody
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6CPG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 291 0.06M Divalents, Buffer system 1 pH 6.5, 40% Ethylene glycol, 20% PEG 8000
Crystal Properties Matthews coefficient Solvent content 3.38 63.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 112.58 α = 90 b = 112.58 β = 90 c = 216.31 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2022-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.9537 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.76 64.112 100 1 19.7 25.9 36627
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.76 2.81 0.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 2.76 64.112 36552 1904 99.981 0.205 0.2023 0.2564 0.2558 92.224
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.438 1.438 -2.875
RMS Deviations Key Refinement Restraint Deviation r_lrange_other 19.925 r_lrange_it 19.922 r_dihedral_angle_3_deg 17.122 r_scangle_it 16.616 r_scangle_other 16.614 r_dihedral_angle_6_deg 16.215 r_mcangle_it 14.312 r_mcangle_other 14.31 r_scbond_it 11.955 r_scbond_other 11.953
RMS Deviations Key Refinement Restraint Deviation r_lrange_other 19.925 r_lrange_it 19.922 r_dihedral_angle_3_deg 17.122 r_scangle_it 16.616 r_scangle_other 16.614 r_dihedral_angle_6_deg 16.215 r_mcangle_it 14.312 r_mcangle_other 14.31 r_scbond_it 11.955 r_scbond_other 11.953 r_mcbond_it 10.525 r_mcbond_other 10.516 r_dihedral_angle_1_deg 7.322 r_dihedral_angle_2_deg 6.636 r_angle_refined_deg 1.451 r_angle_other_deg 0.497 r_symmetry_xyhbond_nbd_refined 0.246 r_nbd_refined 0.236 r_dihedral_angle_other_2_deg 0.215 r_symmetry_nbd_other 0.202 r_nbtor_refined 0.193 r_nbd_other 0.177 r_xyhbond_nbd_refined 0.144 r_symmetry_nbtor_other 0.084 r_symmetry_nbd_refined 0.077 r_chiral_restr 0.065 r_chiral_restr_other 0.044 r_symmetry_xyhbond_nbd_other 0.025 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5772 Nucleic Acid Atoms Solvent Atoms 87 Heterogen Atoms 61
Software Software Software Name Purpose REFMAC refinement xia2 data reduction xia2 data scaling PHASER phasing