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FKBP51FK1 F67E/K58 (i, i+9) in complex with SAFit1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4TW7
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 32% PEG 3350, 0.2M NH4-acetate, 0.1 M HEPES-NaOH pH 7.5
Crystal Properties Matthews coefficient Solvent content 2.05 40.01
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.063 α = 90 b = 48.541 β = 90 c = 56.031 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 S 6M 2023-01-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.918400 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 42.06 99.7 0.083 0.094 0.043 0.999 14.9 8.5 15660
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.63 1.536 1.737 0.801 0.527 8.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.6 36.715 15615 779 99.459 0.187 0.186 0.1858 0.2105 0.211 24.129
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.949 -1.304 -0.645
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.686 r_dihedral_angle_6_deg 15.877 r_dihedral_angle_3_deg 11.915 r_dihedral_angle_1_deg 8.241 r_lrange_other 5.341 r_lrange_it 5.333 r_scangle_it 3.552 r_scangle_other 3.55 r_mcangle_it 2.899 r_mcangle_other 2.897
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.686 r_dihedral_angle_6_deg 15.877 r_dihedral_angle_3_deg 11.915 r_dihedral_angle_1_deg 8.241 r_lrange_other 5.341 r_lrange_it 5.333 r_scangle_it 3.552 r_scangle_other 3.55 r_mcangle_it 2.899 r_mcangle_other 2.897 r_scbond_it 2.235 r_scbond_other 2.233 r_mcbond_it 1.744 r_mcbond_other 1.743 r_angle_refined_deg 1.726 r_chiral_restr_other 1.345 r_angle_other_deg 1.206 r_nbd_refined 0.412 r_symmetry_nbd_refined 0.204 r_nbd_other 0.198 r_symmetry_nbd_other 0.195 r_nbtor_refined 0.181 r_xyhbond_nbd_refined 0.177 r_symmetry_xyhbond_nbd_refined 0.138 r_symmetry_nbtor_other 0.081 r_chiral_restr 0.076 r_bond_refined_d 0.011 r_gen_planes_refined 0.01 r_bond_other_d 0.005 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 940 Nucleic Acid Atoms Solvent Atoms 54 Heterogen Atoms 70
Software Software Software Name Purpose REFMAC refinement REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing