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FKBP51FK1 F67E/K60Orn (i, i+7) in complex with SAFit1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4TW7
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 30% PEG3350, 0.2M NH4-acetate, 0.1M HEPES-NaOH pH 7.5
Crystal Properties Matthews coefficient Solvent content 2.24 45.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.223 α = 90 b = 48.369 β = 90 c = 57.195 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS3 S 6M 2023-01-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.918400 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 45.22 97.6 0.058 0.066 0.03 0.999 18.7 8.5 20120
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.53 1.156 1.317 0.621 0.729 8.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 36.96 20089 1010 97.067 0.185 0.1838 0.1836 0.2069 0.2063 24.414
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.527 -0.926 -0.601
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 17.127 r_dihedral_angle_3_deg 13.182 r_dihedral_angle_1_deg 7.953 r_lrange_it 5.938 r_lrange_other 5.826 r_dihedral_angle_2_deg 4.611 r_scangle_it 4.007 r_scangle_other 4.004 r_mcangle_it 3.535 r_mcangle_other 3.532
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 17.127 r_dihedral_angle_3_deg 13.182 r_dihedral_angle_1_deg 7.953 r_lrange_it 5.938 r_lrange_other 5.826 r_dihedral_angle_2_deg 4.611 r_scangle_it 4.007 r_scangle_other 4.004 r_mcangle_it 3.535 r_mcangle_other 3.532 r_scbond_it 2.619 r_scbond_other 2.616 r_mcbond_it 2.204 r_mcbond_other 2.204 r_angle_refined_deg 1.794 r_chiral_restr_other 1.355 r_angle_other_deg 1.207 r_nbd_refined 0.398 r_symmetry_nbd_other 0.196 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.172 r_nbd_other 0.144 r_symmetry_xyhbond_nbd_refined 0.142 r_chiral_restr 0.087 r_symmetry_nbtor_other 0.083 r_symmetry_nbd_refined 0.071 r_bond_refined_d 0.012 r_gen_planes_refined 0.011 r_bond_other_d 0.005 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 945 Nucleic Acid Atoms Solvent Atoms 104 Heterogen Atoms 70
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing