8PH6

X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DPhF)(CO3)3] in condition B

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7.5	293	2.0 M sodium formate and 0.1 M HEPES buffer at pH 7.5

Crystal Properties
Matthews coefficient	Solvent content
2.01	38.75

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 76.88	α = 90
b = 76.88	β = 90
c = 38.61	γ = 90

Symmetry
Space Group	P 43 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2022-06-13	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ELETTRA BEAMLINE 11.2C	1	ELETTRA	11.2C

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.07	54.36	99.8	0.038	1	36.3	19		51851

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.07	1.08			0.754	0.833	2.3

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	1.07	54.36	49863	2503	96.786	0.171	0.17	0.1929	12.596

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.009			-0.009		0.017

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	16.177
r_dihedral_angle_3_deg	15.1
r_dihedral_angle_2_deg	9.907
r_dihedral_angle_1_deg	6.84
r_lrange_it	6.451
r_lrange_other	5.47
r_scangle_other	3.286
r_scangle_it	3.072
r_angle_refined_deg	2.165
r_scbond_other	2.124
r_scbond_it	2.023
r_mcangle_other	1.906
r_mcangle_it	1.888
r_mcbond_it	1.263
r_mcbond_other	1.24
r_angle_other_deg	0.737
r_xyhbond_nbd_refined	0.268
r_symmetry_nbd_refined	0.264
r_nbd_other	0.264
r_nbd_refined	0.253
r_symmetry_xyhbond_nbd_refined	0.231
r_symmetry_nbd_other	0.213
r_nbtor_refined	0.185
r_chiral_restr	0.109
r_symmetry_nbtor_other	0.084
r_symmetry_xyhbond_nbd_other	0.034
r_bond_refined_d	0.012
r_gen_planes_refined	0.011
r_gen_planes_other	0.004
r_bond_other_d	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1001
Nucleic Acid Atoms
Solvent Atoms	196
Heterogen Atoms	116

Software

Software
Software Name	Purpose
REFMAC	refinement
autoPROC	data reduction
autoPROC	data scaling
PHASER	phasing