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Structure of 5D3-Fab and nanobody(Nb8)-bound ABCG2
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 3.807 f_angle_d 0.619 f_chiral_restr 0.041 f_bond_d 0.004 f_plane_restr 0.004
Sample Structure of nanobody (Nb8)-bound ABCG2 Sample Components ATP-binding cassette sub-family G member 2 Nanobody 5D3(Fab) heavy and light chain variable domain
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE-PROPANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 233072 Reported Resolution (Å) 3.04 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 72
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 600 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING Coot MODEL REFINEMENT RELION 3.1 CLASSIFICATION RELION 3.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION