8OOH

Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.


ELECTRON MICROSCOPY
Sample
The subfamily III haloalkane dehalogenase DhmeA from Haloferax mediterranei
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles55074
Reported Resolution (Å)7
Resolution MethodFSC 0.143 CUT-OFF
Other Details1)C1 Non-uniform Refinement 2)C3 Volume Alignment 3)C3 Symmetry Expansion (55074 particles expanded to 165 222 particles) 4)C1 Local Refinement
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeFEI FALCON II (4k x 4k)GATAN K2 QUANTUM (4k x 4k)
Electron Dose (electrons/Å**2)4873
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)1000
Maximum Defocus (nm)2200
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
EM Software
TaskSoftware PackageVersion
CLASSIFICATIONcryoSPARCv4
RECONSTRUCTIONcryoSPARCv4
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION