8OJB

HSV-1 DNA polymerase-processivity factor complex in exonuclease state active site

ELECTRON MICROSCOPY

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Refinement

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	16.32
r_lrange_other	16.256
r_lrange_it	16.249
r_dihedral_angle_3_deg	13.002
r_mcangle_it	7.984
r_mcangle_other	7.983
r_scangle_it	7.858
r_scangle_other	7.857
r_dihedral_angle_2_deg	6.56
r_dihedral_angle_1_deg	6.556
r_mcbond_it	4.424
r_mcbond_other	4.424
r_scbond_it	4.362
r_scbond_other	4.362
r_dihedral_angle_other_2_deg	1.72
r_angle_refined_deg	1.406
r_angle_other_deg	0.475
r_metal_ion_refined	0.259
r_nbd_refined	0.21
r_symmetry_nbd_other	0.187
r_nbtor_refined	0.185
r_xyhbond_nbd_refined	0.146
r_symmetry_nbtor_other	0.078
r_chiral_restr	0.07
r_bond_refined_d	0.007
r_gen_planes_refined	0.007
r_gen_planes_other	0.001
r_bond_other_d

Sample
HSV-1 DNA polymerase-processivity factor complex in exonuclease state

Specimen Preparation
Sample Aggregation State	PARTICLE
Vitrification Instrument	FEI VITROBOT MARK IV
Cryogen Name	ETHANE-PROPANE
Sample Vitrification Details

3D Reconstruction
Reconstruction Method	SINGLE PARTICLE
Number of Particles	142948
Reported Resolution (Å)	1.9
Resolution Method	FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type	POINT

Map-Model Fitting and Refinement
Id	1 (7LUF)
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details

Data Acquisition
Detector Type	GATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)	58

Imaging Experiment	1
Date of Experiment
Temperature (Kelvin)
Microscope Model	FEI TITAN KRIOS
Minimum Defocus (nm)	500
Maximum Defocus (nm)	1500
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS	2.7
Imaging Mode	BRIGHT FIELD
Specimen Holder Model	FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification	165000
Calibrated Magnification
Source	FIELD EMISSION GUN
Acceleration Voltage (kV)	300
Imaging Details

EM Software
Task	Software Package	Version
PARTICLE SELECTION	cryoSPARC	3.3
IMAGE ACQUISITION	EPU
CTF CORRECTION	CTFFIND	4.1
MODEL FITTING	UCSF ChimeraX
MODEL REFINEMENT	Coot
INITIAL EULER ASSIGNMENT	cryoSPARC	3.3
FINAL EULER ASSIGNMENT	cryoSPARC	4
RECONSTRUCTION	cryoSPARC	4

Image Processing
CTF Correction Type	CTF Correction Details	Number of Particles Selected	Particle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION