☰ Navigation Tabs
Human Carbonic Anhydrase II in complex with 4-(((1-(3-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)propyl)-1H-1,2,3-triazol-4-yl)methyl)amino)benzenesulfonamide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4FIK native protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 296 1.5 M sodium citrate, 0.1 M Tris pH 8.0
Crystal Properties Matthews coefficient Solvent content 2.11 41.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.46 α = 90 b = 41.48 β = 104.469 c = 72.35 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2021-11-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 11.2C 1.0 ELETTRA 11.2C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.32 41.147 93 0.049 0.053 0.999 20.25 5.79 53363
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.32 1.36 59.2 0.488 0.583 0.789 2.24 3.23
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT NONE 1.321 41.147 53363 2582 93.033 0.119 0.1173 0.126 0.1559 0.1594 16.229
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.636 0.565 0.865 -0.459
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.264 r_dihedral_angle_4_deg 24.334 r_dihedral_angle_3_deg 13.023 r_dihedral_angle_1_deg 6.919 r_scangle_it 6.122 r_scangle_other 6.121 r_scbond_it 5.205 r_scbond_other 5.203 r_lrange_other 4.902 r_lrange_it 4.896
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.264 r_dihedral_angle_4_deg 24.334 r_dihedral_angle_3_deg 13.023 r_dihedral_angle_1_deg 6.919 r_scangle_it 6.122 r_scangle_other 6.121 r_scbond_it 5.205 r_scbond_other 5.203 r_lrange_other 4.902 r_lrange_it 4.896 r_rigid_bond_restr 3.59 r_mcangle_other 2.687 r_mcangle_it 2.68 r_mcbond_it 2.213 r_mcbond_other 2.203 r_angle_refined_deg 2.012 r_angle_other_deg 1.541 r_symmetry_nbd_refined 0.299 r_nbd_refined 0.254 r_nbd_other 0.218 r_symmetry_nbd_other 0.2 r_nbtor_refined 0.176 r_xyhbond_nbd_refined 0.155 r_symmetry_xyhbond_nbd_refined 0.139 r_chiral_restr 0.12 r_metal_ion_refined 0.091 r_symmetry_nbtor_other 0.09 r_symmetry_xyhbond_nbd_other 0.045 r_bond_refined_d 0.015 r_gen_planes_refined 0.012 r_gen_planes_other 0.003 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2043 Nucleic Acid Atoms Solvent Atoms 277 Heterogen Atoms 71
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing