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NMR structure of human leptin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 2 2D 1H-13C HSQC aromatic 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 3 2D 1H-13C HSQC aliphatic 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 4 3D HNCA 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 5 3D HN(CO)CA 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 6 3D HCCH-TOCSY 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800 7 4D time-shared 13C, 15N-edited NOESY 0.8 mM [U-13C; U-15N] leptin 95% H2O/5% D2O 5 mM 4.5 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software distance geometry Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 4 data analysis NMRView Johnson, One Moon Scientific 5 chemical shift assignment NMRView Johnson, One Moon Scientific 6 peak picking NMRView Johnson, One Moon Scientific