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NMR solution structure of the 1:1 complex of a platinum(II) ligand L1-transpt covalently bound to a G-quadruplex MYT1L
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 2 2D 1H-1H NOESY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 3 2D 1H-1H NOESY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 4 2D 1H-1H NOESY 1.20 mM / MYT1L, 1.20 mM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 11 2D 1H-1H NOESY 1.20 mM / MYT1L, 1.20 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 5 2D 1H-1H TOCSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 10 2D 1H-1H TOCSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 9 2D 1H-1H TOCSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 8 2D 1H-1H COSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 7 2D 1H-1H COSY2D 1H-1H COSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 6 2D 1H-1H COSY 1.20 mM / MYT1L, 2.40 mM / L1-transpt 100% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 14 2D 1H-15N HSQC 100 uM [U-15N]-Gua MYT1L_15N_G, 200 uM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 13 2D 1H-15N HSQC 100 uM [U-15N]-Thy MYT1L_15N_T, 200 uM / L1-transpt 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 15 2D 1H-1H NOESY 1.20 mM / MYT1L 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement X-PLOR Version 3.1 Brunger 2 structure calculation X-PLOR X-PLOR X-PLOR 3 chemical shift assignment NMRFAM-SPARKY Woonghee Lee 4 peak picking NMRFAM-SPARKY NMRFAM-SPARKY