8IJC

NMR solution structure of the 1:1 complex of a platinum(II) ligand L1-transpt covalently bound to a G-quadruplex MYT1L


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1.20 mM / MYT1L, 2.40 mM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
22D 1H-1H NOESY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
32D 1H-1H NOESY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
42D 1H-1H NOESY1.20 mM / MYT1L, 1.20 mM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
112D 1H-1H NOESY1.20 mM / MYT1L, 1.20 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
52D 1H-1H TOCSY1.20 mM / MYT1L, 2.40 mM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
102D 1H-1H TOCSY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
92D 1H-1H TOCSY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
82D 1H-1H COSY1.20 mM / MYT1L, 2.40 mM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
72D 1H-1H COSY2D 1H-1H COSY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
62D 1H-1H COSY1.20 mM / MYT1L, 2.40 mM / L1-transpt100% D2O40 mM7.01 atm298Bruker AVANCE III 600
142D 1H-15N HSQC100 uM [U-15N]-Gua MYT1L_15N_G, 200 uM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
132D 1H-15N HSQC100 uM [U-15N]-Thy MYT1L_15N_T, 200 uM / L1-transpt90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
152D 1H-1H NOESY1.20 mM / MYT1L90% H2O/10% D2O40 mM7.01 atm298Bruker AVANCE III 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number15
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLORVersion 3.1Brunger
2structure calculationX-PLORX-PLORX-PLOR
3chemical shift assignmentNMRFAM-SPARKYWoonghee Lee
4peak pickingNMRFAM-SPARKYNMRFAM-SPARKY