Monomer structure of transforming growth factor beta induced protein (TGFBIp) G623R fibril
SOLID-STATE NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | NCA | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| 7 | NCO | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| 3 | DARR | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| 4 | NCACX | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| 5 | NCOCX | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| 6 | CANCO | 10 mg/mL [U-100% 13C; U-100% 15N] TGFBIp G623R | ethanol/water | 20 mM | 8 | 1 atm | 286 | Bruker AVANCE III 800 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | GROMACS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum |
| Conformers Calculated Total Number | 20 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | TopSpin | Bruker Biospin | |
| 2 | chemical shift assignment | NMRFAM-SPARKY | Lee W, Tonelli M, Markley JL | |
| 3 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 4 | refinement | GROMACS | Paul Bauer, Berk Hess, Erik Lindahl | |
