8GQO | pdb_00008gqo

Solution NMR structure of vaccinia virus protein A28: an entry-fusion complex component

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
2	2D 1H-13C HSQC	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
3	3D HNCACB	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
4	3D CBCA(CO)NH	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
5	3D HNCO	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
6	3D HN(CA)CO	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
7	3D HCCH-TOCSY	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
8	3D C(CO)NH	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
9	3D H(CCO)NH	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
10	3D HBHA(CO)NH	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
11	3D 1H-15N NOESY	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
12	3D 1H-13C NOESY	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800
13	3D 1H-15N TOCSY	50 mM sodium chloride, 50 mM MES	90% H2O/10% D2O	50 NaCl mM	6.5	1 atm	298	Bruker AVANCE 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber		Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2	structure calculation	X-PLOR NIH	3.4	Schwieters, Kuszewski, Tjandra and Clore
3	chemical shift assignment	NMRViewJ	9.2.0	One Moon Scientific Incorporation
4	peak picking	NMRViewJ	9.2.0	One Moon Scientific Incorporation