8FH9

Crystal Structure Of Aldose Reductase (AKR1B1) Complexed With NADP+ And AT-007

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	5.5	298	25% PEG 3,350, 100 mM Bis-Tris

Crystal Properties
Matthews coefficient	Solvent content
2.19	43.9

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 40.179	α = 75.478
b = 46.888	β = 67.366
c = 47.296	γ = 76.634

Symmetry
Space Group	P 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2019-02-13	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SSRL BEAMLINE BL9-2	0.97946	SSRL	BL9-2

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.7	36.688	90.7	0.035	0.05	0.035	0.999	14.4	3.8		30424

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.7	1.73			0.187	0.265	0.187	0.967		3.8

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	1.7	36.688	30421	1516	90.666	0.152	0.1501	0.1818	0.05	16.5

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.172	-0.032	0.58	-0.761	-0.495	0.717

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	17.914
r_dihedral_angle_3_deg	14.222
r_dihedral_angle_2_deg	8.87
r_dihedral_angle_1_deg	6.046
r_lrange_it	6.04
r_lrange_other	6.019
r_scangle_it	5.154
r_scangle_other	5.153
r_scbond_it	3.345
r_scbond_other	3.344
r_mcangle_it	2.649
r_mcangle_other	2.649
r_angle_refined_deg	1.977
r_mcbond_it	1.94
r_mcbond_other	1.939
r_dihedral_angle_other_2_deg	0.976
r_angle_other_deg	0.682
r_nbd_refined	0.22
r_symmetry_nbd_refined	0.205
r_symmetry_nbd_other	0.194
r_nbtor_refined	0.186
r_nbd_other	0.185
r_symmetry_xyhbond_nbd_refined	0.175
r_xyhbond_nbd_refined	0.146
r_chiral_restr	0.115
r_symmetry_nbtor_other	0.083
r_bond_refined_d	0.015
r_gen_planes_refined	0.014
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	2517
Nucleic Acid Atoms
Solvent Atoms	148
Heterogen Atoms	96

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing