8ES2

Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Aib10Asn11 turn


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY4.2 mM Designed miniprotein oPPalpha: Aib10Asn11 turn, 0.2 mM DSS, 8.2 mM sodium phosphate, 1.8 mM potassium phosphate, 137 mM sodium chloride, 2.7 mM potassium chloride90% H2O/10% D2O163 mM7.41 atm278Bruker AVANCE 700
22D 1H-1H COSY4.2 mM Designed miniprotein oPPalpha: Aib10Asn11 turn, 0.2 mM DSS, 8.2 mM sodium phosphate, 1.8 mM potassium phosphate, 137 mM sodium chloride, 2.7 mM potassium chloride90% H2O/10% D2O163 mM7.41 atm278Bruker AVANCE 700
32D 1H-1H NOESY4.2 mM Designed miniprotein oPPalpha: Aib10Asn11 turn, 0.2 mM DSS, 8.2 mM sodium phosphate, 1.8 mM potassium phosphate, 137 mM sodium chloride, 2.7 mM potassium chloride90% H2O/10% D2O163 mM7.41 atm278Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpinBruker Biospin
2data analysisNMRFAM-SPARKYLee, Tonelli, Markley
3refinementARIALinge, O'Donoghue and Nilges
4structure calculationARIALinge, O'Donoghue and Nilges