8DSB

Lambda Bacteriophage Orf63


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
22D 1H-13C HSQC5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
32D 1H-13C HSQC aliphatic5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
43D 1H-13C NOESY5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
53D 1H-15N NOESY5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
123D C(CO)NH5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
113D CBCA(CO)NH5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
103D HNCACB5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
93D HNCA5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
83D HN(CO)CA5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
73D HNCO5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
63D HN(CA)CO5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
153D HCCH-TOCSY5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
143D CCH-TOCSY5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
133D 12C-filtered 13C-edited5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Varian INOVA 600
163D HBHA(CO)NH5 mM TRIS, 140 mM sodium chloride, 0.05 % w/v sodium azide, 0.8 mM [U-98% 13C; U-98% 15N] sample90% H2O/10% D2O140 mM7.71 atm310Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing100 structures chosen from 5000CYANA
simulated annealing20 structures chosen from 100Rosetta
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisCcpNmr AnalysisCCPN
3refinementCYANAGuntert, Mumenthaler and Wuthrich
4refinementRosettaBaker
5structure calculationCYANA