☰ Navigation Tabs
The FERM domain of human moesin with two bound peptides identified by phage display
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6TXQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.5 277 200 mM ammonium sulphate, 100 mM sodium acetate trihydrate, 25% PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.55 51.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.714 α = 90 b = 37.263 β = 108.15 c = 81.53 γ = 90
Symmetry Space Group P 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 XE 16M 2022-05-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 0.9795 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.42 77.5 59.7 0.997 13.2 22.4 51601
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.42 1.56 12.1 0.707 1.4 25.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.52 77.473 50355 1990 71.167 0.184 0.1823 0.1954 0.2272 0.2388 22.463
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.121 -0.013 0.07 -0.151
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 16.586 r_dihedral_angle_3_deg 14.101 r_lrange_it 8.811 r_lrange_other 8.695 r_dihedral_angle_2_deg 8.687 r_dihedral_angle_1_deg 7.294 r_scangle_it 5.141 r_scangle_other 5.14 r_mcangle_it 4.272 r_mcangle_other 4.272
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 16.586 r_dihedral_angle_3_deg 14.101 r_lrange_it 8.811 r_lrange_other 8.695 r_dihedral_angle_2_deg 8.687 r_dihedral_angle_1_deg 7.294 r_scangle_it 5.141 r_scangle_other 5.14 r_mcangle_it 4.272 r_mcangle_other 4.272 r_scbond_it 3.195 r_scbond_other 3.194 r_mcbond_it 2.747 r_mcbond_other 2.734 r_angle_refined_deg 1.727 r_chiral_restr_other 1.138 r_angle_other_deg 1.102 r_symmetry_nbd_refined 0.699 r_nbd_other 0.622 r_nbd_refined 0.249 r_symmetry_xyhbond_nbd_refined 0.247 r_xyhbond_nbd_refined 0.202 r_symmetry_nbd_other 0.201 r_nbtor_refined 0.185 r_chiral_restr 0.087 r_symmetry_nbtor_other 0.081 r_bond_other_d 0.053 r_symmetry_xyhbond_nbd_other 0.017 r_bond_refined_d 0.011 r_gen_planes_refined 0.01 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2833 Nucleic Acid Atoms Solvent Atoms 460 Heterogen Atoms 39
Software Software Software Name Purpose REFMAC refinement DIALS data reduction STARANISO data scaling PHASER phasing