8C8A
The NMR structure of the MAX28 effector from Magnaporthe oryzae
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 0.4 mM [U-15N] MAX28, 10 mM sodium phosphate, 150 mM sodium chloride | 95% H2O/5% D2O | 150 mM | 6.8 | 1 atm | 300 | Bruker AVANCE III 700 |
2 | 3D 1H-15N TOCSY | 0.4 mM [U-15N] MAX28, 10 mM sodium phosphate, 150 mM sodium chloride | 95% H2O/5% D2O | 150 mM | 6.8 | 1 atm | 300 | Bruker AVANCE III 700 |
3 | 2D 1H-1H NOESY | 0.4 mM [U-15N] MAX28, 10 mM sodium phosphate, 150 mM sodium chloride | 100% D2O | 150 mM | 6.8 | 1 atm | 300 | Bruker AVANCE III 800 |
4 | 2D 1H-1H TOCSY | 0.4 mM [U-15N] MAX28, 10 mM sodium phosphate, 150 mM sodium chloride | 100% D2O | 150 mM | 6.8 | 1 atm | 300 | Bruker AVANCE III 800 |
5 | 2D DQF-COSY | 0.4 mM [U-15N] MAX28, 10 mM sodium phosphate, 150 mM sodium chloride | 100% D2O | 150 mM | 6.8 | 1 atm | 300 | Bruker AVANCE III 800 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 700 |
2 | Bruker | AVANCE III | 800 |
NMR Refinement | ||
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Method | Details | Software |
molecular dynamics | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.2 | Brunger, Adams, Clore, Gros, Nilges and Read |
2 | structure calculation | CYANA | 3.98.13 | Guntert, Mumenthaler and Wuthrich |
3 | chemical shift assignment | CINDY | 2.1 | Padilla, A. |
4 | peak picking | TopSpin | 3.6 | Bruker Biospin |