8C2D

14-3-3 in complex with Pyrin pS208


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2770.19 M CaCl2, 5% glycerol, 26% PEG 400, 0.095 M HEPES, pH 7.5
Crystal Properties
Matthews coefficientSolvent content
2.5150.95

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.959α = 90
b = 111.538β = 90
c = 62.659γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M-F2020-08-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPETRA III, DESY BEAMLINE P111.03320PETRA III, DESYP11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1541.6699.80.999274.315990
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.152.150.99515.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE2.1541.6591597586099.8560.1610.15870.209919.066
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.6270.123-0.75
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.692
r_dihedral_angle_3_deg14.1
r_dihedral_angle_4_deg13.848
r_lrange_it5.991
r_lrange_other5.956
r_dihedral_angle_1_deg5.302
r_scangle_other4.049
r_scangle_it4.048
r_mcangle_it3.177
r_mcangle_other3.177
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.692
r_dihedral_angle_3_deg14.1
r_dihedral_angle_4_deg13.848
r_lrange_it5.991
r_lrange_other5.956
r_dihedral_angle_1_deg5.302
r_scangle_other4.049
r_scangle_it4.048
r_mcangle_it3.177
r_mcangle_other3.177
r_scbond_it2.533
r_scbond_other2.531
r_mcbond_it1.988
r_mcbond_other1.986
r_angle_refined_deg1.532
r_angle_other_deg1.447
r_nbd_refined0.21
r_symmetry_nbd_refined0.187
r_xyhbond_nbd_refined0.185
r_symmetry_nbd_other0.163
r_nbtor_refined0.161
r_symmetry_xyhbond_nbd_refined0.148
r_nbd_other0.144
r_symmetry_nbtor_other0.08
r_chiral_restr0.079
r_bond_refined_d0.01
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1890
Nucleic Acid Atoms
Solvent Atoms256
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
DIALSdata reduction
DIALSdata scaling
PHASERphasing