8C1Y

Small molecule stabilizer for 14-3-3/ChREBP (Cmd 30)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES pH = 7.5 27% PEG400 0.19 M CaCl2 5% glycerol
Crystal Properties
Matthews coefficientSolvent content
2.4750.12

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.626α = 90
b = 111.651β = 90
c = 62.827γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2021-08-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPETRA III, DESY BEAMLINE P111.033220PETRA III, DESYP11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.845.5198.90.99918.813.226659
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.840.635

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.845.5125322132998.70.190910.18920.2228RANDOM32.267
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.39-0.71-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other14.483
r_long_range_B_refined14.424
r_scangle_other13.435
r_dihedral_angle_3_deg12.146
r_scbond_it11.377
r_scbond_other11.372
r_mcangle_other9.88
r_mcangle_it9.871
r_mcbond_it7.507
r_mcbond_other7.505
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other14.483
r_long_range_B_refined14.424
r_scangle_other13.435
r_dihedral_angle_3_deg12.146
r_scbond_it11.377
r_scbond_other11.372
r_mcangle_other9.88
r_mcangle_it9.871
r_mcbond_it7.507
r_mcbond_other7.505
r_dihedral_angle_2_deg6.729
r_dihedral_angle_1_deg4.488
r_angle_refined_deg0.857
r_angle_other_deg0.368
r_chiral_restr0.039
r_bond_refined_d0.005
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2027
Nucleic Acid Atoms
Solvent Atoms107
Heterogen Atoms25

Software

Software
Software NamePurpose
REFMACrefinement
DIALSdata reduction
Aimlessdata scaling
MOLREPphasing