8B39

Small molecular stabilizer for ERalpha and 14-3-3 (1080299)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES (pH 7.3), PEG400 (24% (v/v)), 0.19 M CaCl2 and 5% (v/v) Glycerol
Crystal Properties
Matthews coefficientSolvent content
2.6653.75

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 82.11α = 90
b = 112.675β = 90
c = 62.456γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2021-12-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID30B0.976254ESRFID30B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.445.5296.50.99416.33.354927
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.41.420.967

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4JC31.445.5252133277295.870.133090.131650.16039RANDOM13.428
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.831.51-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.229
r_dihedral_angle_4_deg18.29
r_dihedral_angle_3_deg10.34
r_dihedral_angle_1_deg4.486
r_rigid_bond_restr3.337
r_long_range_B_refined3.065
r_long_range_B_other2.68
r_scangle_other2.133
r_angle_refined_deg1.792
r_scbond_it1.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.229
r_dihedral_angle_4_deg18.29
r_dihedral_angle_3_deg10.34
r_dihedral_angle_1_deg4.486
r_rigid_bond_restr3.337
r_long_range_B_refined3.065
r_long_range_B_other2.68
r_scangle_other2.133
r_angle_refined_deg1.792
r_scbond_it1.69
r_scbond_other1.69
r_mcangle_it1.538
r_mcangle_other1.537
r_angle_other_deg1.321
r_mcbond_it1.141
r_mcbond_other1.141
r_chiral_restr0.303
r_bond_refined_d0.016
r_gen_planes_refined0.01
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1899
Nucleic Acid Atoms
Solvent Atoms351
Heterogen Atoms32

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing