8AXU

Small molecule stabilizer for ERalpha and 14-3-3 (1075297)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES (pH 7.7), PEG400 (28% (v/v)), 0.19 M CaCl2 and 5% (v/v) Glycerol
Crystal Properties
Matthews coefficientSolvent content
2.6753.87

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 82.318α = 90
b = 112.315β = 90
c = 62.654γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER2 X 9M2021-05-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID30B0.96863ESRFID30B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.645.5599.950.99929.6512.738639
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.6570.976

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4JC31.645.5536748198799.940.139530.137940.1695RANDOM17.13
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.96-0.81-0.15
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.72
r_dihedral_angle_4_deg14.227
r_dihedral_angle_3_deg10.637
r_dihedral_angle_1_deg4.763
r_long_range_B_refined4.246
r_long_range_B_other3.856
r_scangle_other2.77
r_mcangle_it2.37
r_mcangle_other2.37
r_scbond_it2.258
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.72
r_dihedral_angle_4_deg14.227
r_dihedral_angle_3_deg10.637
r_dihedral_angle_1_deg4.763
r_long_range_B_refined4.246
r_long_range_B_other3.856
r_scangle_other2.77
r_mcangle_it2.37
r_mcangle_other2.37
r_scbond_it2.258
r_scbond_other2.257
r_mcbond_it1.694
r_mcbond_other1.689
r_rigid_bond_restr1.367
r_angle_refined_deg1.309
r_angle_other_deg1.26
r_chiral_restr0.084
r_bond_refined_d0.009
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1899
Nucleic Acid Atoms
Solvent Atoms262
Heterogen Atoms29

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing