8AIM

Ugi-2 SAUNG complex

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		289.15	0.1 M HEPES, pH 7.5, 70% v/v MPD

Crystal Properties
Matthews coefficient	Solvent content
2.79	55.85

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 137.652	α = 90
b = 142.816	β = 90
c = 82.759	γ = 90

Symmetry
Space Group	C 2 2 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	289.15	PIXEL	DECTRIS EIGER X 16M		2019-10-14	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04	0.980	Diamond	I04

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.6	52.92	100	0.98	1.62	1.9		25462

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.6	2.72			0.528

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	3WDG, 1UDI	2.6	52.92	25462	1215	99.922	0.204	0.202	0.2456	43.352

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
1.41			-1.779		0.37

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.261
r_dihedral_angle_4_deg	20.012
r_dihedral_angle_3_deg	16.094
r_lrange_other	7.233
r_lrange_it	7.231
r_dihedral_angle_1_deg	7.219
r_scangle_it	5.301
r_scangle_other	5.301
r_mcangle_it	4.741
r_mcangle_other	4.741
r_scbond_it	3.388
r_scbond_other	3.388
r_mcbond_it	3.053
r_mcbond_other	3.024
r_angle_refined_deg	1.469
r_angle_other_deg	1.212
r_symmetry_nbd_refined	0.215
r_nbd_refined	0.214
r_nbd_other	0.2
r_symmetry_nbd_other	0.188
r_nbtor_refined	0.165
r_symmetry_xyhbond_nbd_refined	0.164
r_xyhbond_nbd_refined	0.149
r_ncsr_local_group_1	0.142
r_ncsr_local_group_2	0.099
r_symmetry_nbtor_other	0.077
r_chiral_restr	0.065
r_bond_refined_d	0.007
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4902
Nucleic Acid Atoms
Solvent Atoms	49
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
MOLREP	phasing