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Room temperature rsEGFP2 in its OFF-state obtained with SFX
Serial Crystallography (SX)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6T39
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 293 120 mM HEPES pH 8.0, 1.5 M ammonium sulphate, 20 mM NaCl
Crystal Properties Matthews coefficient Solvent content 2.07 40.51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.97 α = 90 b = 63.04 β = 90 c = 72.03 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 CCD MPCCD 2019-11-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 FREE ELECTRON LASER SACLA BEAMLINE BL3 1.18 SACLA BL3
Serial Crystallography Sample delivery method Diffraction ID Description Sample Delivery Method 1 injection
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.46 47.44 88.77 0.98 7.537 191.82 36821
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.463 1.514 0.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6T39 1.46 47.44 35031 1790 88.48 0.1709 0.1696 0.1764 0.1952 0.1948 RANDOM 27.071
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.84 0.27 0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.093 r_dihedral_angle_3_deg 12.596 r_dihedral_angle_4_deg 11.657 r_dihedral_angle_1_deg 6.534 r_angle_refined_deg 2.281 r_angle_other_deg 1.179 r_chiral_restr 0.141 r_bond_refined_d 0.024 r_gen_planes_refined 0.014 r_gen_planes_other 0.007
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.093 r_dihedral_angle_3_deg 12.596 r_dihedral_angle_4_deg 11.657 r_dihedral_angle_1_deg 6.534 r_angle_refined_deg 2.281 r_angle_other_deg 1.179 r_chiral_restr 0.141 r_bond_refined_d 0.024 r_gen_planes_refined 0.014 r_gen_planes_other 0.007 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1883 Nucleic Acid Atoms Solvent Atoms 173 Heterogen Atoms 536
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction CrystFEL data reduction CrystFEL data scaling REFMAC phasing