7ZQO | pdb_00007zqo

d(CGCGCG)2 Z-DNA AT 7150 BARS (715 MPa)

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	2ELG

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	BATCH MODE	6.9	298	10 mg of compound dissolved in 100 microLiter of 20 % MPD cacodylate buffer + 0.01 M MgCl2

Crystal Properties
Matthews coefficient	Solvent content
1.65	25.27

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 17.77	α = 90
b = 30.87	β = 90
c = 43.45	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	298	CCD	ADSC QUANTUM 315r		2007-06-24	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE BM30A	0.75003	ESRF	BM30A

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.41	25.165	69.9	0.104	0.066	0.99	10.6	5.6		3464

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.41	1.44	66.6		0.45	0.301	0.88		5.7

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	FOURIER SYNTHESIS	FREE R-VALUE	2ELG	1.8	25.165	1711	83	69.98	0.215	0.2121	0.21	0.2831	0.28	10.969

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.366			0.149		0.217

RMS Deviations
Key	Refinement Restraint Deviation
r_lrange_it	3.316
r_lrange_other	3.153
r_angle_refined_deg	1.901
r_scangle_it	1.428
r_scangle_other	1.426
r_scbond_it	1.006
r_scbond_other	1.006
r_symmetry_xyhbond_nbd_refined	0.325
r_angle_other_deg	0.291
r_nbtor_refined	0.27
r_symmetry_nbd_other	0.246
r_xyhbond_nbd_refined	0.227
r_nbd_other	0.214
r_symmetry_nbd_refined	0.196
r_nbd_refined	0.171
r_chiral_restr	0.169
r_symmetry_nbtor_other	0.095
r_gen_planes_refined	0.017
r_bond_refined_d	0.005
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms
Nucleic Acid Atoms	240
Solvent Atoms	48
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
FFT	phasing