7QNL

LOV2-DARPIN FUSION - D4_DeltaLOV


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2932 M ammonium sulphate, 2% PEG400, 100 mM HEPES, pH 7.5
Crystal Properties
Matthews coefficientSolvent content
2.6954.31

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 89.741α = 90
b = 89.741β = 90
c = 69.3γ = 90
Symmetry
Space GroupP 42 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2013-12-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06DA1.0SLSX06DA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.7163.4695.80.0660.0130.9992825.222744
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.711.850.5841.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE1SVX1.7163.45621609113572.4170.20.19730.263535.86
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.0970.097-0.194
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.697
r_dihedral_angle_4_deg26.471
r_dihedral_angle_3_deg15.361
r_lrange_it9.57
r_lrange_other9.302
r_dihedral_angle_1_deg5.824
r_scangle_it5.161
r_scangle_other4.656
r_scbond_it3.475
r_scbond_other2.944
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.697
r_dihedral_angle_4_deg26.471
r_dihedral_angle_3_deg15.361
r_lrange_it9.57
r_lrange_other9.302
r_dihedral_angle_1_deg5.824
r_scangle_it5.161
r_scangle_other4.656
r_scbond_it3.475
r_scbond_other2.944
r_mcangle_it2.736
r_mcangle_other2.736
r_mcbond_it1.958
r_mcbond_other1.955
r_angle_refined_deg1.752
r_angle_other_deg1.467
r_symmetry_xyhbond_nbd_refined0.241
r_symmetry_nbd_refined0.235
r_xyhbond_nbd_refined0.23
r_nbd_other0.228
r_nbd_refined0.227
r_symmetry_nbd_other0.176
r_nbtor_refined0.159
r_chiral_restr0.092
r_symmetry_nbtor_other0.08
r_symmetry_xyhbond_nbd_other0.027
r_bond_refined_d0.013
r_gen_planes_refined0.01
r_gen_planes_other0.005
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1823
Nucleic Acid Atoms
Solvent Atoms167
Heterogen Atoms50

Software

Software
Software NamePurpose
REFMACrefinement
autoPROCdata reduction
STARANISOdata scaling
MOLREPphasing