7OAH | pdb_00007oah

conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta2/A

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	7OAA

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		294	0.1 M tri-sodium citrate pH 5.5, 20% (w/v) PEG 3000

Crystal Properties
Matthews coefficient	Solvent content
2.24	44.99

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 26.126	α = 90
b = 38.769	β = 94.846
c = 132.277	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M-F		2017-07-10	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X10SA	1.00	SLS	X10SA

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.69	37.19	97.9	0.082	1	13.73	6.66		29121

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.69	1.8	92.6		0.912	0.86	1.78	6.76

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	7OAA	1.694	37.19	29118	1456	97.902	0.223	0.2204	0.23	0.2678	0.27	34.516

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.799		-1.263	0.164		0.837

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	30.442
r_dihedral_angle_3_deg	15.469
r_dihedral_angle_4_deg	10.94
r_lrange_it	8.43
r_lrange_other	8.406
r_scangle_it	6.553
r_scangle_other	6.552
r_scbond_it	4.324
r_scbond_other	4.323
r_mcangle_other	3.429
r_mcangle_it	3.427
r_dihedral_angle_1_deg	3.232
r_mcbond_it	2.448
r_mcbond_other	2.438
r_angle_other_deg	1.103
r_angle_refined_deg	1.008
r_symmetry_xyhbond_nbd_refined	0.291
r_nbd_refined	0.237
r_symmetry_nbd_refined	0.203
r_nbd_other	0.194
r_ncsr_local_group_1	0.182
r_nbtor_refined	0.173
r_ncsr_local_group_2	0.167
r_ncsr_local_group_3	0.161
r_symmetry_nbd_other	0.14
r_xyhbond_nbd_refined	0.131
r_symmetry_nbtor_other	0.077
r_chiral_restr	0.052
r_xyhbond_nbd_other	0.042
r_bond_refined_d	0.007
r_bond_other_d	0.004
r_gen_planes_refined	0.003
r_gen_planes_other	0.003

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	2010
Nucleic Acid Atoms
Solvent Atoms	166
Heterogen Atoms	13

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling
MOLREP	phasing