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FGTGFG segment from the Nucleoporin p54, residues 63-68
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 ammonium sulfate
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 15.71 α = 90 b = 9.4 β = 108.52 c = 23.26 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2017-07-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.9792 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 22.06 98.8 0.186 0.215 0.972 5.43 3.969 2137 11.597
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.23 92.3 0.386 0.454 0.915 2.63 3.133
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.2 22.06 1923 214 98.98 0.146 0.1429 0.1721 0.1745 0.1911 RANDOM 5.347
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.35 -0.33 -0.37 0.77
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 10.35 r_dihedral_angle_3_deg 8.763 r_dihedral_angle_1_deg 5.914 r_angle_refined_deg 1.968 r_angle_other_deg 1.868 r_rigid_bond_restr 1.55 r_chiral_restr 0.087 r_bond_refined_d 0.017 r_gen_planes_refined 0.011 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 10.35 r_dihedral_angle_3_deg 8.763 r_dihedral_angle_1_deg 5.914 r_angle_refined_deg 1.968 r_angle_other_deg 1.868 r_rigid_bond_restr 1.55 r_chiral_restr 0.087 r_bond_refined_d 0.017 r_gen_planes_refined 0.011 r_bond_other_d 0.001 r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 84 Nucleic Acid Atoms Solvent Atoms 2 Heterogen Atoms 7
Software Software Software Name Purpose XDS data reduction XSCALE data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction