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Rules for designing protein fold switches and their implications for the folding code
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D HSQC 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 2 3D HNCACB 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 3 3D CBCA(CO)NH 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 4 3D HNCO 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 5 3D H(CCO)NH 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 6 3D 15NNOESY 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 7 3D 13CNOESY 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 8 3D HNHA 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600 9 3D C(CO)NH 0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate 95% H2O/5% D2O 100 mM 7.0 ambient 298 Bruker AVANCE DMX 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE DMX 600
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 1000 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger A. T. et.al. 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 chemical shift assignment NMRFAM-SPARKY NMRFAM 4 peak picking NMRFAM-SPARKY NMRFAM 5 collection TopSpin Bruker Biospin 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax