7MP7

Rules for designing protein fold switches and their implications for the folding code


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D HSQC0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
23D HNCACB0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
33D CBCA(CO)NH0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
43D HNCO0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
53D H(CCO)NH0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
63D 15NNOESY0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
73D 13CNOESY0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
83D HNHA0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
93D C(CO)NH0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate95% H2O/5% D2O100 mM7.0ambient298Bruker AVANCE DMX 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE DMX600
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
3chemical shift assignmentNMRFAM-SPARKYNMRFAM
4peak pickingNMRFAM-SPARKYNMRFAM
5collectionTopSpinBruker Biospin
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax