7L8V
NMR Structure of half-calcified calmodulin mutant (CaMEF12) bound to the IQ-motif of CaV1.2
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-15N NOESY | 0.5 mM [U-95% 15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION | 90% H2O/10% D2O | 0.1 M | 7.4 | 1 atm | 303 | Bruker AVANCE III 800 |
2 | 3D 1H-15N TOCSY | 0.5 mM [U-95% 15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION | 90% H2O/10% D2O | 0.1 M | 7.4 | 1 atm | 303 | Bruker AVANCE III 800 |
3 | 3D 1H-13C NOESY | 0.5 mM [U-13C; U-15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION | 90% H2O/10% D2O | 0.1 M | 7.4 | 1 atm | 303 | Bruker AVANCE III 800 |
4 | 3D HCCH-TOCSY | 0.5 mM [U-13C; U-15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION | 90% H2O/10% D2O | 0.1 M | 7.4 | 1 atm | 303 | Bruker AVANCE III 800 |
5 | 2D 1H-13C HSQC aliphatic | 0.5 mM [U-13C; U-15N] calmodulin, 0.75 mM IQ-motif, 10 mM TRIS, 2 mM CALCIUM ION | 90% H2O/10% D2O | 0.1 M | 7.4 | 1 atm | 303 | Bruker AVANCE III 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 800 |
2 | Bruker | AVANCE III | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DGSA-distance geometry simulated annealing | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 40 |
Conformers Submitted Total Number | 12 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | Brunger A. T. et.al. | |
2 | structure calculation | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
3 | chemical shift assignment | Sparky | Goddard | |
4 | peak picking | Sparky | Goddard |