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Structure of TFIIH/Rad4-Rad23-Rad33/DNA in DNA opening
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6CFI
Sample 10 component complex of Rad4-23, Rad33 and TFIIH on damaged DNA
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument LEICA EM CPC Cryogen Name ETHANE Sample Vitrification Details Manually blotted by Leica EM CPC
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 73146 Reported Resolution (Å) 9.25 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (6CFI) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION Latitude CTF CORRECTION CTFFIND 4.1.13 INITIAL EULER ASSIGNMENT RELION 3.0.8 FINAL EULER ASSIGNMENT RELION 3.0.8 RECONSTRUCTION RELION 3.0.8
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION