X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP295MPD
Crystal Properties
Matthews coefficientSolvent content
2.1542.82

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 69.095α = 90
b = 52.358β = 97.352
c = 92.835γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2011-11-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U10.9793SSRFBL17U1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.919.57493.60.0520.9967.92.248615
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.940.6240.5062.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSADFREE R-VALUE1.919.5748602240893.0380.2030.20040.24830.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.824-0.0243.04-1.171
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.457
r_dihedral_angle_4_deg20.446
r_dihedral_angle_3_deg16.033
r_dihedral_angle_1_deg5.551
r_lrange_it4.765
r_lrange_other4.765
r_scangle_it4.371
r_scangle_other4.37
r_scbond_it3.467
r_scbond_other3.466
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.457
r_dihedral_angle_4_deg20.446
r_dihedral_angle_3_deg16.033
r_dihedral_angle_1_deg5.551
r_lrange_it4.765
r_lrange_other4.765
r_scangle_it4.371
r_scangle_other4.37
r_scbond_it3.467
r_scbond_other3.466
r_mcangle_other3.439
r_mcangle_it3.437
r_mcbond_it2.872
r_mcbond_other2.87
r_angle_other_deg2.295
r_angle_refined_deg1.684
r_nbd_other0.263
r_symmetry_nbd_other0.226
r_xyhbond_nbd_refined0.222
r_nbd_refined0.217
r_nbtor_refined0.188
r_symmetry_nbd_refined0.184
r_symmetry_xyhbond_nbd_refined0.163
r_chiral_restr0.104
r_symmetry_xyhbond_nbd_other0.1
r_symmetry_nbtor_other0.09
r_bond_other_d0.035
r_bond_refined_d0.014
r_gen_planes_refined0.005
r_gen_planes_other0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4991
Nucleic Acid Atoms
Solvent Atoms334
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
CRANK2phasing