7CLU | pdb_00007clu

PigF with SAH

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		295	MPD

Crystal Properties
Matthews coefficient	Solvent content
2.15	42.82

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 69.095	α = 90
b = 52.358	β = 97.352
c = 92.835	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 315r		2011-11-02	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SSRF BEAMLINE BL17U1	0.9793	SSRF	BL17U1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.9	19.574	93.6	0.052	0.996	7.9	2.2		48615

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.9	1.94			0.624	0.506		2.1

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	SAD	FREE R-VALUE	1.9	19.57	48602	2408	93.038	0.203	0.2004	0.2	0.248	0.25	30.8

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.824		-0.024	3.04		-1.171

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	33.457
r_dihedral_angle_4_deg	20.446
r_dihedral_angle_3_deg	16.033
r_dihedral_angle_1_deg	5.551
r_lrange_it	4.765
r_lrange_other	4.765
r_scangle_it	4.371
r_scangle_other	4.37
r_scbond_it	3.467
r_scbond_other	3.466
r_mcangle_other	3.439
r_mcangle_it	3.437
r_mcbond_it	2.872
r_mcbond_other	2.87
r_angle_other_deg	2.295
r_angle_refined_deg	1.684
r_nbd_other	0.263
r_symmetry_nbd_other	0.226
r_xyhbond_nbd_refined	0.222
r_nbd_refined	0.217
r_nbtor_refined	0.188
r_symmetry_nbd_refined	0.184
r_symmetry_xyhbond_nbd_refined	0.163
r_chiral_restr	0.104
r_symmetry_xyhbond_nbd_other	0.1
r_symmetry_nbtor_other	0.09
r_bond_other_d	0.035
r_bond_refined_d	0.014
r_gen_planes_refined	0.005
r_gen_planes_other	0.005

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4991
Nucleic Acid Atoms
Solvent Atoms	334
Heterogen Atoms	10

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
CRANK2	phasing