7Z9B

Sam68


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP293Ammonium sulfate

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 136.726α = 90
b = 237.593β = 90
c = 82.317γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2020-06-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALBA BEAMLINE XALOC0.978ALBAXALOC

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.31188.899.50.9967.13.719923
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.333.350.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE5EMO3.333118.79719914105499.3710.2180.21670.2503117.854
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-8.49615.213-6.717
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.547
r_dihedral_angle_4_deg28.548
r_lrange_it23.716
r_dihedral_angle_3_deg21.596
r_scangle_it19.503
r_mcangle_it16.404
r_scbond_it14.161
r_mcbond_it10.892
r_dihedral_angle_1_deg8.238
r_angle_refined_deg2.025
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.547
r_dihedral_angle_4_deg28.548
r_lrange_it23.716
r_dihedral_angle_3_deg21.596
r_scangle_it19.503
r_mcangle_it16.404
r_scbond_it14.161
r_mcbond_it10.892
r_dihedral_angle_1_deg8.238
r_angle_refined_deg2.025
r_nbtor_refined0.331
r_nbd_refined0.253
r_symmetry_nbd_refined0.235
r_chiral_restr0.184
r_xyhbond_nbd_refined0.163
r_symmetry_xyhbond_nbd_refined0.111
r_ncsr_local_group_30.077
r_ncsr_local_group_10.073
r_ncsr_local_group_20.073
r_bond_refined_d0.008
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2786
Nucleic Acid Atoms
Solvent Atoms9
Heterogen Atoms37

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing