7Z89

Sam68


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2931.8 M ammonium sulfate, 0.1 M sodium iodide
Crystal Properties
Matthews coefficientSolvent content
4.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 97.778α = 90
b = 97.5β = 90
c = 81.919γ = 90
Symmetry
Space GroupP 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2019-07-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALBA BEAMLINE XALOC0.97926ALBAXALOC

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.7648.937940.99914.53.819107
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.762.860.483

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE5EMO2.7648.9371910794291.9760.2010.19920.235892.094
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.564-5.4664.902
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.963
r_dihedral_angle_4_deg27.855
r_dihedral_angle_3_deg20.49
r_lrange_it17.657
r_scangle_it16.259
r_scbond_it12.433
r_mcangle_it10.802
r_mcbond_it8.749
r_dihedral_angle_1_deg7.109
r_angle_refined_deg1.849
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.963
r_dihedral_angle_4_deg27.855
r_dihedral_angle_3_deg20.49
r_lrange_it17.657
r_scangle_it16.259
r_scbond_it12.433
r_mcangle_it10.802
r_mcbond_it8.749
r_dihedral_angle_1_deg7.109
r_angle_refined_deg1.849
r_symmetry_xyhbond_nbd_refined0.814
r_nbtor_refined0.317
r_nbd_refined0.244
r_symmetry_nbd_refined0.232
r_xyhbond_nbd_refined0.18
r_chiral_restr0.153
r_ncsr_local_group_10.053
r_gen_planes_refined0.009
r_bond_refined_d0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1884
Nucleic Acid Atoms
Solvent Atoms21
Heterogen Atoms76

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing