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Solution structure of GltJ GYF domain from Myxococcus xanthus
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-100% 13C; U-100% 15N] GYF 90% H2O/10% D2O 0.1 mM 7 1 atm 303 Bruker AVANCE III 600 2 3D 1H-13C NOESY 1 mM [U-100% 13C; U-100% 15N] GYF 90% H2O/10% D2O 0.1 mM 7 1 atm 303 Bruker AVANCE III 600 3 3D 1H-13C NOESY aliphatic 1 mM [U-100% 13C; U-100% 15N] GYF 90% H2O/10% D2O 0.1 mM 7 1 atm 303 Bruker AVANCE III 600 4 3D 1H-13C NOESY aromatic 1 mM [U-100% 13C; U-100% 15N] GYF 90% H2O/10% D2O 0.1 mM 7 1 atm 303 Bruker AVANCE III 600 5 2D 1H-15N HSQC 1 mM [U-100% 13C; U-100% 15N] GYF 90% H2O/10% D2O 0.1 mM 7 1 atm 303 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 19 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CcpNmr Analysis CCPN 4 peak picking CcpNmr Analysis CCPN