7XGA

NMR strucutre of chimeric protein for model of PHD-Stella complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
22D 1H-13C HSQC aliphatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
32D 1H-13C HSQC aliphatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride100% D2O50 mM7.01 atm293Bruker AVANCE III 500
43D HNCO0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
53D HN(CO)CA0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
63D HNCACB0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
73D CBCA(CO)NH0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
82D 1H-13C HSQC aromatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
92D 1H-13C HSQC aromatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride100% D2O50 mM7.01 atm293Bruker AVANCE III 500
103D HCCH-TOCSY0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
113D H(CCO)NH0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
123D C(CO)NH0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
133D 1H-15N NOESY0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
143D 1H-13C NOESY aliphatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 500
153D 1H-13C NOESY aliphatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride100% D2O50 mM7.01 atm293Bruker AVANCE III 800
163D 1H-13C NOESY aromatic0.66 mM [U-100% 13C; U-100% 15N] PHD_Stella, 10 mM sodium phosphate, 50 mM sodium chloride90% H2O/10% D2O50 mM7.01 atm293Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III500
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.5Bruker Biospin
2processingNMRPipe2017Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentCYANA3.98Guntert, Mumenthaler and Wuthrich
4peak pickingMAGRO2.01.41Kobayashi, N.
5data analysisNMRViewJ9Johnson, B. J.
6structure calculationCYANA3.98Guntert, Mumenthaler and Wuthrich
7refinementAmber12Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman