7XFV

Dimeric G-quadruplex DNA Formed in the Proximal Promoter of VEGFR-2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY2.0 mM VGFER-1490% H2O/10% D2O100 mM6.81 atm293Varian INOVA 600
22D 1H-1H TOCSY2.0 mM VGFER-1490% H2O/10% D2O100 mM6.81 atm293Varian INOVA 600
32D DQF-COSY2.0 mM VGFER-1490% H2O/10% D2O100 mM6.81 atm293Varian INOVA 600
42D 1H-13C HSQC2.0 mM VGFER-1490% H2O/10% D2O100 mM6.81 atm293Varian INOVA 600
52D 1H-1H NOESY2.0 mM VGFER-1490% H2O/10% D2O100 mM6.81 atm293Bruker AVANCE 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
distance geometryCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3chemical shift assignmentSparkyGoddard