NMR solution structures of p300 TAZ2 domain in complex with BRD4-NUT F1c domain binding motif #2
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D HNCACB | 6.3 | 1 atm | 298 | Bruker AVANCE NEO 600 | |||
| 2 | 3D HN(COCA)CB | 6.3 | 1 atm | 298 | Bruker AVANCE NEO 600 | |||
| 3 | 3D 1H-15N NOESY | 6.3 | 1 atm | 298 | Bruker AVANCE NEO 800 | |||
| 4 | 3D 1H-13C NOESY aliphatic | 6.3 | 1 atm | 298 | Bruker AVANCE NEO 800 | |||
| 5 | 3D 1H-13C NOESY aromatic | 6.3 | 1 atm | 298 | Bruker AVANCE NEO 800 | |||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE NEO | 600 |
| 2 | Bruker | AVANCE NEO | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry | ARIA | |
| simulated annealing | CNS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | ARIA | Linge, O'Donoghue and Nilges | |
| 2 | structure calculation | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
| 3 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
| 4 | peak picking | NMRView | Johnson, One Moon Scientific | |
| 5 | collection | TopSpin | Bruker Biospin | |
| 6 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
