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NMR solution structure of the 1:1 complex of a pyridostatin (PDS) bound to a G-quadruplex MYT1L
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1.0 mM / MYT1L, 1.0 mM / PDS 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 2 2D 1H-1H TOCSY 1.0 mM / MYT1L, 1.0 mM / PDS 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 3 2D 1H-1H COSY 1.0 mM / MYT1L, 1.0 mM / PDS 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600 4 2D 1H-1H NOESY 1.0 mM / MYT1L, 1.0 mM / PDS 90% H2O/10% D2O 40 mM 7.0 1 atm 278 Bruker AVANCE III 600 5 2D 1H-1H NOESY 1.2 mM / MYT1L 90% H2O/10% D2O 40 mM 7.0 1 atm 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 15 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement X-PLOR Brunger 2 structure calculation X-PLOR Brunger 3 chemical shift assignment NMRFAM-SPARKY Woonghee Lee 4 peak picking NMRFAM-SPARKY Woonghee Lee