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Crystal Structure of Zn bound human Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OW6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.05 M Zinc acetate dihydrate, 20% w/v Polyethylene glycol 3,350
Crystal Properties Matthews coefficient Solvent content 1.89 34.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.2 α = 90.02 b = 52.45 β = 90 c = 53.37 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2020-11-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.98011 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 49.2 96 0.149 0.992 6.8 3.5 28719
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.21 1.124 0.197 0.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1ow6 2.163 49.2 27757 1388 97.27 0.218 0.2148 0.2152 0.275 0.2742 50.538
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.339 0.201 -0.481 -0.828 -0.536 3.167
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.854 r_dihedral_angle_4_deg 19.068 r_dihedral_angle_3_deg 18.782 r_lrange_it 12.857 r_scangle_it 9.969 r_scbond_it 6.717 r_mcangle_it 6.514 r_dihedral_angle_1_deg 5.687 r_mcbond_it 4.326 r_angle_refined_deg 1.646
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 43.854 r_dihedral_angle_4_deg 19.068 r_dihedral_angle_3_deg 18.782 r_lrange_it 12.857 r_scangle_it 9.969 r_scbond_it 6.717 r_mcangle_it 6.514 r_dihedral_angle_1_deg 5.687 r_mcbond_it 4.326 r_angle_refined_deg 1.646 r_nbtor_refined 0.315 r_symmetry_nbd_refined 0.28 r_nbd_refined 0.246 r_xyhbond_nbd_refined 0.173 r_symmetry_xyhbond_nbd_refined 0.161 r_metal_ion_refined 0.129 r_chiral_restr 0.124 r_symmetry_metal_ion_refined 0.051 r_bond_refined_d 0.007 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4105 Nucleic Acid Atoms Solvent Atoms 96 Heterogen Atoms 8
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MoRDa phasing