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Crystal structure of Zn bound human Focal Adhesion Targeting (FAT) domain of the Focal Adhesion Kinase
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OW6
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 0.05 M Zinc acetate dihydrate, 20% w/v Polyethylene glycol 3,350
Crystal Properties Matthews coefficient Solvent content 1.93 36.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.906 α = 90 b = 53.099 β = 90 c = 54.085 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2020-11-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.98011 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.94 48.91 99.4 0.138 0.998 12.4 12.8 10806
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.94 1.99 4.59 0.325
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1ow6 1.943 37.893 10610 529 97.815 0.228 0.2261 0.2267 0.2625 0.2623 52.812
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.7 -2.019 2.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.508 r_dihedral_angle_3_deg 17.642 r_dihedral_angle_4_deg 17.347 r_lrange_it 12.903 r_scangle_it 9.965 r_scbond_it 6.604 r_mcangle_it 6.553 r_dihedral_angle_1_deg 5.259 r_mcbond_it 4.453 r_angle_refined_deg 1.585
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.508 r_dihedral_angle_3_deg 17.642 r_dihedral_angle_4_deg 17.347 r_lrange_it 12.903 r_scangle_it 9.965 r_scbond_it 6.604 r_mcangle_it 6.553 r_dihedral_angle_1_deg 5.259 r_mcbond_it 4.453 r_angle_refined_deg 1.585 r_symmetry_nbd_refined 0.321 r_nbtor_refined 0.312 r_symmetry_xyhbond_nbd_refined 0.26 r_nbd_refined 0.226 r_xyhbond_nbd_refined 0.165 r_chiral_restr 0.121 r_symmetry_metal_ion_refined 0.113 r_metal_ion_refined 0.023 r_bond_refined_d 0.007 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1029 Nucleic Acid Atoms Solvent Atoms 25 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling MoRDa phasing