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GFP Nanobody NMR Structure
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCA 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 2 3D HNCACB 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 3 3D HN(COCA)CB 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 4 3D HCCH-TOCSY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 5 3D HCCONH-TOCSY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 6 3D-CCONH-TOCSY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 7 3D CCH-TOCSY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 8 2D 1H-13C HSQC aliphatic 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800 9 2D 1H-13C HSQC aromatic 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800 10 2D 1H-15N HSQC 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 600 11 2D HBCBCGCDCDHE 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800 12 2D HBCBCGCDCDHE 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800 13 3D 1H-13C NOESY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800 14 3D 1H-15N NOESY 1 mM [U-13C; U-15N] Anti-GFP Nanobody 90% H2O/10% D2O 167.2 mM 7.4 1 atm 298 Agilent DD2 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Agilent DD2 800 2 Agilent DD2 600
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria Final iteration Conformers Calculated Total Number 120 Conformers Submitted Total Number 20 Representative Model 1 (none)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment NMRView Johnson, One Moon Scientific 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax