7UWZ | pdb_00007uwz

NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide	95% H2O/5% D2O	132 mM	6.5	1 atm	298	Bruker AVANCE III HD 600
2	3D 1H-13C NOESY aliphatic	1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide	95% H2O/5% D2O	132 mM	6.5	1 atm	298	Bruker AVANCE III HD 600
3	3D 1H-13C NOESY aromatic	1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide	95% H2O/5% D2O	132 mM	6.5	1 atm	298	Bruker AVANCE III HD 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III HD	600

NMR Refinement
Method	Details	Software
torsion angle dynamics		CYANA
molecular dynamics		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (target function)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	data analysis	TopSpin	3.6	Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	XEASY		Bartels et al.
4	chemical shift assignment	GARANT		Bartels, Guntert, Billeter and Wuthrich
7	refinement	CYANA	3.98.13	Guntert, Mumenthaler and Wuthrich
6	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
5	data analysis	TALOS		Cornilescu, Delaglio and Bax
8	structure calculation	CYANA	3.98.13	Guntert, Mumenthaler and Wuthrich
9	geometry optimization	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore