7UWZ

NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide95% H2O/5% D2O132 mM6.51 atm298Bruker AVANCE III HD 600
23D 1H-13C NOESY aliphatic1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide95% H2O/5% D2O132 mM6.51 atm298Bruker AVANCE III HD 600
33D 1H-13C NOESY aromatic1.25 mM [U-13C; U-15N] 33_bp_sh3, 50 mM sodium phosphate, 50 mM sodium chloride, 0.02 % w/v sodium azide95% H2O/5% D2O132 mM6.51 atm298Bruker AVANCE III HD 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
molecular dynamicsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisTopSpin3.6Bruker Biospin
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisXEASYBartels et al.
4chemical shift assignmentGARANTBartels, Guntert, Billeter and Wuthrich
7refinementCYANA3.98.13Guntert, Mumenthaler and Wuthrich
6refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
5data analysisTALOSCornilescu, Delaglio and Bax
8structure calculationCYANA3.98.13Guntert, Mumenthaler and Wuthrich
9geometry optimizationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore