7UFI

VchTnsC AAA+ ATPase with DNA, single heptamer


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.596
r_dihedral_angle_4_deg21.309
r_dihedral_angle_3_deg19.955
r_long_range_B_refined13.999
r_long_range_B_other13.999
r_scangle_other8.607
r_mcangle_other8.315
r_mcangle_it8.314
r_dihedral_angle_1_deg7.232
r_mcbond_it4.97
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.596
r_dihedral_angle_4_deg21.309
r_dihedral_angle_3_deg19.955
r_long_range_B_refined13.999
r_long_range_B_other13.999
r_scangle_other8.607
r_mcangle_other8.315
r_mcangle_it8.314
r_dihedral_angle_1_deg7.232
r_mcbond_it4.97
r_mcbond_other4.966
r_scbond_it4.669
r_scbond_other4.668
r_angle_refined_deg1.367
r_angle_other_deg1.131
r_chiral_restr0.062
r_gen_planes_refined0.004
r_bond_refined_d0.003
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
VchTNsC AAA+ ATPase with ATP and DNA (single heptamer form)
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameNITROGEN
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles105000
Reported Resolution (Å)3.4
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)65
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)500
Maximum Defocus (nm)2000
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS2.7
Imaging ModeBRIGHT FIELD
Specimen Holder ModelFEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
NONE