7TXX

Solution structure for Bartonella henselae BamE, a component of the beta-barrel assembly machinery complex. Seattle Structural Genomics Center for Infectious Disease target BaheA.17605.a

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 750
2	2D 1H-13C HSQC aliphatic	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 750
3	2D 1H-13C HSQC aromatic	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 750
4	3D 1H-13C NOESY aliphatic	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 600
5	3D 1H-13C NOESY aromatic	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 800
13	3D 1H-15N NOESY	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 750
12	3D C(CO)NH	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 600
11	3D HNCACB	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 600
10	3D HNCA	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 600
9	3D 1H-15N TOCSY	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Varian VXRS 600
8	3D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	100% D2O	120 mM	7	1 atm	293	Varian VXRS 600
7	2D 1H-15N HSQC	1 mM [U-99% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	100% D2O	120 mM	7	1 atm	293	Varian VXRS 600
6	2D 1H-13C HSQC aliphatic	1 mM [U-10% 13C; U-99% 15N] BA5, 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT	93% H2O/7% D2O	120 mM	7	1 atm	293	Bruker AVANCE II 750

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	VXRS	750
2	Varian	VXRS	600
3	Varian	VXRS	800
4	Bruker	AVANCE II	750

NMR Refinement
Method	Details	Software
torsion angle dynamics	STRUCTURE DETERMINATION WAS PERFORMED ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) AFTER ADDING 2% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE RESTRAINTS AND THE VDW	CYANA
molecular dynamics	water refinement	CNS

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	Felix	2007	Accelrys Software Inc.
2	structure calculation	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
3	data analysis	NMRFAM-SPARKY	1.414	NMRFAM
4	peak picking	NMRFAM-SPARKY	1.414	NMRFAM
5	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
6	data analysis	PSVS	1.5	Bhattacharya and Montelione
7	data analysis	TALOS+		Talos

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.