7TV8

Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1.6 mM Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop, 0.25 mM DSS90% H2O/10% D2O10 mM41 atm300Bruker AVANCE 700
22D 1H-1H NOESY1.6 mM Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop, 0.25 mM DSS90% H2O/10% D2O10 mM41 atm300Bruker AVANCE 700
32D 1H-1H COSY1.6 mM Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop, 0.25 mM DSS90% H2O/10% D2O10 mM41 atm300Bruker AVANCE 700
42D DQF-COSY1.6 mM Heterogeneous-backbone proteomimetic analogue of the disulfide-rich venom peptide lasiocepsin: D-Ala modified loop, 0.25 mM DSS90% H2O/10% D2O10 mM41 atm300Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpinBruker Biospin
2data analysisNMRFAM-SPARKYLee, Tonelli, Markley
3refinementARIALinge, O'Donoghue and Nilges
4structure calculationARIALinge, O'Donoghue and Nilges