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LOV2-DARPIN fusion : D4_deltaDARP
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2V0W
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 1 M lithium sulphate,
2% PEG8000,
pH undefined
Crystal Properties Matthews coefficient Solvent content 1.98 37.98
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.142 α = 90 b = 50.768 β = 90 c = 87.263 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-12-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA 1.0 SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 43.88 83.5 0.044 0.013 0.999 20.9 12.4 46107
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.1 1.19 74.8 0.702 1.9 9.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2V0W 1.1 43.88 43785 2322 63.44 0.1543 0.1517 0.1967 0.2033 0.2185 RANDOM 18.628
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.11 -0.05 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.898 r_dihedral_angle_4_deg 21.602 r_dihedral_angle_3_deg 14.187 r_dihedral_angle_1_deg 6.602 r_rigid_bond_restr 3.514 r_angle_refined_deg 2.067 r_angle_other_deg 1.557 r_chiral_restr 0.109 r_bond_refined_d 0.016 r_gen_planes_refined 0.012
Show All KeysRMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.898 r_dihedral_angle_4_deg 21.602 r_dihedral_angle_3_deg 14.187 r_dihedral_angle_1_deg 6.602 r_rigid_bond_restr 3.514 r_angle_refined_deg 2.067 r_angle_other_deg 1.557 r_chiral_restr 0.109 r_bond_refined_d 0.016 r_gen_planes_refined 0.012 r_gen_planes_other 0.003 r_bond_other_d 0.001
Hide All KeysNon-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1577 Nucleic Acid Atoms Solvent Atoms 242 Heterogen Atoms 32
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction autoPROC data reduction STARANISO data scaling MOLREP phasing